MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Citrobacter koseri 19428wH4_BL23

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PROKKA Genome Annotation:

contigs: 33

bases: 4,826,282 bps

CDS: 4,459

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 81

misc RNA:

Total features: 4,551

Total number of protein coding genes annotated/found: 4,459

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5017\|JADGKP010000001.1	SEQF5017_02260	NA AA	1299/433	2376968-2375670	Alpha-ketoglutarate permease
SEQF5017\|JADGKP010000001.1	SEQF5017_02259	NA AA	273/91	2375401-2375673	hypothetical protein
SEQF5017\|JADGKP010000001.1	SEQF5017_02258	NA AA	1356/452	2373946-2375301	CDP-diacylglycerol--serine O-phosphatidyltransferase
SEQF5017\|JADGKP010000001.1	SEQF5017_02257	NA AA	2661/887	2371171-2373831	Peptidyl-lysine N-acetyltransferase Pat
SEQF5017\|JADGKP010000001.1	SEQF5017_02256	NA AA	699/233	2370437-2371135	hypothetical protein
SEQF5017\|JADGKP010000001.1	SEQF5017_02255	NA AA	420/140	2369948-2370367	Thioredoxin 2
SEQF5017\|JADGKP010000001.1	SEQF5017_02254	NA AA	1047/349	2369739-2368693	putative tRNA/rRNA methyltransferase YfiF
SEQF5017\|JADGKP010000001.1	SEQF5017_02253	NA AA	690/230	2367839-2368528	Uracil-DNA glycosylase
SEQF5017\|JADGKP010000001.1	SEQF5017_02252	NA AA	384/128	2367520-2367137	Autonomous glycyl radical cofactor
SEQF5017\|JADGKP010000001.1	SEQF5017_02251	NA AA	1338/446	2365754-2367091	ATP-dependent RNA helicase SrmB
SEQF5017\|JADGKP010000001.1	SEQF5017_02250	NA AA	738/246	2365622-2364885	tRNA1(Val) (adenine(37)-N6)-methyltransferase
SEQF5017\|JADGKP010000001.1	SEQF5017_02249	NA AA	1623/541	2363278-2364900	L-aspartate oxidase
SEQF5017\|JADGKP010000001.1	SEQF5017_02248	NA AA	576/192	2362852-2362277	ECF RNA polymerase sigma-E factor
SEQF5017\|JADGKP010000001.1	SEQF5017_02247	NA AA	651/217	2362245-2361595	Anti-sigma-E factor RseA
SEQF5017\|JADGKP010000001.1	SEQF5017_02246	NA AA	957/319	2361595-2360639	Sigma-E factor regulatory protein RseB
SEQF5017\|JADGKP010000001.1	SEQF5017_02245	NA AA	480/160	2360642-2360163	Protein RseC
SEQF5017\|JADGKP010000001.1	SEQF5017_02244	NA AA	156/52	2360072-2360227	hypothetical protein
SEQF5017\|JADGKP010000001.1	SEQF5017_02243	NA AA	1800/600	2359880-2358081	Elongation factor 4
SEQF5017\|JADGKP010000001.1	SEQF5017_02242	NA AA	975/325	2358065-2357091	Signal peptidase I
SEQF5017\|JADGKP010000001.1	SEQF5017_02241	NA AA	681/227	2356869-2356189	Ribonuclease 3

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Page last updated: July 7, 2021 08:39:35